Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NIPAL1Q6NVV3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
NIPAL1Q6NVV3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NIPAL1Q6NVV3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NIPAL1Q6NVV3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.7■■□□□ 1.38
NIPAL1Q6NVV3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
NIPAL1Q6NVV3 LINC01003-201ENST00000564834 1764 ntBASIC23.7■■□□□ 1.38
NIPAL1Q6NVV3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NIPAL1Q6NVV3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
NIPAL1Q6NVV3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.69■■□□□ 1.38
NIPAL1Q6NVV3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NIPAL1Q6NVV3 BX255925.1-201ENST00000566954 1854 ntBASIC23.68■■□□□ 1.38
NIPAL1Q6NVV3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NIPAL1Q6NVV3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.67■■□□□ 1.38
NIPAL1Q6NVV3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NIPAL1Q6NVV3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NIPAL1Q6NVV3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.67■■□□□ 1.38
NIPAL1Q6NVV3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
NIPAL1Q6NVV3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NIPAL1Q6NVV3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
NIPAL1Q6NVV3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
NIPAL1Q6NVV3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
NIPAL1Q6NVV3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NIPAL1Q6NVV3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NIPAL1Q6NVV3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.66■■□□□ 1.38
NIPAL1Q6NVV3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.66■■□□□ 1.38
NIPAL1Q6NVV3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NIPAL1Q6NVV3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NIPAL1Q6NVV3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NIPAL1Q6NVV3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.65■■□□□ 1.38
NIPAL1Q6NVV3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.65■■□□□ 1.38
NIPAL1Q6NVV3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.65■■□□□ 1.38
NIPAL1Q6NVV3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.65■■□□□ 1.38
NIPAL1Q6NVV3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
NIPAL1Q6NVV3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.64■■□□□ 1.38
NIPAL1Q6NVV3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NIPAL1Q6NVV3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
NIPAL1Q6NVV3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.63■■□□□ 1.37
NIPAL1Q6NVV3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NIPAL1Q6NVV3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NIPAL1Q6NVV3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NIPAL1Q6NVV3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.63■■□□□ 1.37
NIPAL1Q6NVV3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NIPAL1Q6NVV3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NIPAL1Q6NVV3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NIPAL1Q6NVV3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NIPAL1Q6NVV3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.61■■□□□ 1.37
NIPAL1Q6NVV3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.61■■□□□ 1.37
NIPAL1Q6NVV3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.61■■□□□ 1.37
NIPAL1Q6NVV3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
NIPAL1Q6NVV3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.61■■□□□ 1.37
NIPAL1Q6NVV3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
NIPAL1Q6NVV3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
NIPAL1Q6NVV3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NIPAL1Q6NVV3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
NIPAL1Q6NVV3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.6■■□□□ 1.37
NIPAL1Q6NVV3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NIPAL1Q6NVV3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NIPAL1Q6NVV3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NIPAL1Q6NVV3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
NIPAL1Q6NVV3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NIPAL1Q6NVV3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.59■■□□□ 1.37
NIPAL1Q6NVV3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.59■■□□□ 1.37
NIPAL1Q6NVV3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NIPAL1Q6NVV3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.58■■□□□ 1.37
NIPAL1Q6NVV3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.57■■□□□ 1.36
NIPAL1Q6NVV3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.57■■□□□ 1.36
NIPAL1Q6NVV3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NIPAL1Q6NVV3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
NIPAL1Q6NVV3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NIPAL1Q6NVV3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
NIPAL1Q6NVV3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.56■■□□□ 1.36
NIPAL1Q6NVV3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.56■■□□□ 1.36
NIPAL1Q6NVV3 WHAMMP3-201ENST00000611636 1609 ntBASIC23.56■■□□□ 1.36
NIPAL1Q6NVV3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
NIPAL1Q6NVV3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NIPAL1Q6NVV3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NIPAL1Q6NVV3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
NIPAL1Q6NVV3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NIPAL1Q6NVV3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.55■■□□□ 1.36
NIPAL1Q6NVV3 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.55■■□□□ 1.36
NIPAL1Q6NVV3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.55■■□□□ 1.36
NIPAL1Q6NVV3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.55■■□□□ 1.36
NIPAL1Q6NVV3 AC022413.1-201ENST00000624602 984 ntBASIC23.55■■□□□ 1.36
NIPAL1Q6NVV3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NIPAL1Q6NVV3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NIPAL1Q6NVV3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NIPAL1Q6NVV3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NIPAL1Q6NVV3 AL359258.2-201ENST00000564063 1566 ntBASIC23.54■■□□□ 1.36
NIPAL1Q6NVV3 AC060814.1-201ENST00000554326 538 ntBASIC23.54■■□□□ 1.36
NIPAL1Q6NVV3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.54■■□□□ 1.36
NIPAL1Q6NVV3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NIPAL1Q6NVV3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NIPAL1Q6NVV3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
NIPAL1Q6NVV3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.53■■□□□ 1.36
NIPAL1Q6NVV3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
NIPAL1Q6NVV3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NIPAL1Q6NVV3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NIPAL1Q6NVV3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
NIPAL1Q6NVV3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms