Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.1■□□□□ 0.81
CEACAM3P40198 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.1■□□□□ 0.81
CEACAM3P40198 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CEACAM3P40198 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CEACAM3P40198 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CEACAM3P40198 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CEACAM3P40198 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CEACAM3P40198 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.09■□□□□ 0.81
CEACAM3P40198 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.09■□□□□ 0.81
CEACAM3P40198 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CEACAM3P40198 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CEACAM3P40198 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
CEACAM3P40198 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CEACAM3P40198 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CEACAM3P40198 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.07■□□□□ 0.8
CEACAM3P40198 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CEACAM3P40198 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CEACAM3P40198 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CEACAM3P40198 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.07■□□□□ 0.8
CEACAM3P40198 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.07■□□□□ 0.8
CEACAM3P40198 AC022413.1-201ENST00000624602 984 ntBASIC20.07■□□□□ 0.8
CEACAM3P40198 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CEACAM3P40198 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CEACAM3P40198 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CEACAM3P40198 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CEACAM3P40198 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CEACAM3P40198 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CEACAM3P40198 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CEACAM3P40198 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CEACAM3P40198 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CEACAM3P40198 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CEACAM3P40198 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CEACAM3P40198 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CEACAM3P40198 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.05■□□□□ 0.8
CEACAM3P40198 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.05■□□□□ 0.8
CEACAM3P40198 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEACAM3P40198 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CEACAM3P40198 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.04■□□□□ 0.8
CEACAM3P40198 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CEACAM3P40198 AL449106.1-201ENST00000608517 1980 ntBASIC20.04■□□□□ 0.8
CEACAM3P40198 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CEACAM3P40198 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CEACAM3P40198 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CEACAM3P40198 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CEACAM3P40198 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CEACAM3P40198 AC060814.1-201ENST00000554326 538 ntBASIC20.03■□□□□ 0.8
CEACAM3P40198 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.03■□□□□ 0.8
CEACAM3P40198 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CEACAM3P40198 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.03■□□□□ 0.8
CEACAM3P40198 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CEACAM3P40198 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CEACAM3P40198 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CEACAM3P40198 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CEACAM3P40198 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CEACAM3P40198 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CEACAM3P40198 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CEACAM3P40198 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CEACAM3P40198 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CEACAM3P40198 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.02■□□□□ 0.8
CEACAM3P40198 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.02■□□□□ 0.8
CEACAM3P40198 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CEACAM3P40198 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.02■□□□□ 0.8
CEACAM3P40198 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CEACAM3P40198 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CEACAM3P40198 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CEACAM3P40198 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CEACAM3P40198 GPX1-201ENST00000419349 1106 ntBASIC20.01■□□□□ 0.79
CEACAM3P40198 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CEACAM3P40198 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CEACAM3P40198 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20■□□□□ 0.79
CEACAM3P40198 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20■□□□□ 0.79
CEACAM3P40198 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CEACAM3P40198 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20■□□□□ 0.79
CEACAM3P40198 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CEACAM3P40198 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CEACAM3P40198 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CEACAM3P40198 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.99■□□□□ 0.79
CEACAM3P40198 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CEACAM3P40198 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CEACAM3P40198 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CEACAM3P40198 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CEACAM3P40198 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CEACAM3P40198 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.97■□□□□ 0.79
CEACAM3P40198 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CEACAM3P40198 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CEACAM3P40198 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CEACAM3P40198 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CEACAM3P40198 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.96■□□□□ 0.79
CEACAM3P40198 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CEACAM3P40198 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CEACAM3P40198 AC142472.1-201ENST00000612013 1741 ntBASIC19.95■□□□□ 0.78
CEACAM3P40198 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.95■□□□□ 0.78
CEACAM3P40198 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CEACAM3P40198 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CEACAM3P40198 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CEACAM3P40198 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CEACAM3P40198 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CEACAM3P40198 ECEL1P2-201ENST00000461596 1295 ntBASIC19.94■□□□□ 0.78
CEACAM3P40198 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.94■□□□□ 0.78
CEACAM3P40198 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms