Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 TFG2YGR005C 1203 nt11.49□□□□□ -0.57
SSN2P38931 YRB2YIL063C 984 nt11.49□□□□□ -0.57
SSN2P38931 MIX17YMR002W 471 nt11.49□□□□□ -0.57
SSN2P38931 YRF1-2YER190W 5046 nt11.49□□□□□ -0.57
SSN2P38931 PRE3YJL001W 648 nt11.48□□□□□ -0.57
SSN2P38931 RNH201YNL072W 924 nt11.48□□□□□ -0.57
SSN2P38931 ERG8YMR220W 1356 nt11.47□□□□□ -0.57
SSN2P38931 ATP10YLR393W 840 nt11.47□□□□□ -0.57
SSN2P38931 UFD1YGR048W 1086 nt11.45□□□□□ -0.58
SSN2P38931 MED6YHR058C 888 nt11.45□□□□□ -0.58
SSN2P38931 SWD1YAR003W 1281 nt11.45□□□□□ -0.58
SSN2P38931 ADH5YBR145W 1056 nt11.45□□□□□ -0.58
SSN2P38931 ADE2YOR128C 1716 nt11.45□□□□□ -0.58
SSN2P38931 VMA3YEL027W 483 nt11.44□□□□□ -0.58
SSN2P38931 TUF1YOR187W 1314 nt11.44□□□□□ -0.58
SSN2P38931 TDP1YBR223C 1635 nt11.44□□□□□ -0.58
SSN2P38931 YDR510C-AYDR510C-A 117 nt11.43□□□□□ -0.58
SSN2P38931 ENB1YOL158C 1821 nt11.43□□□□□ -0.58
SSN2P38931 YMR034CYMR034C 1305 nt11.43□□□□□ -0.58
SSN2P38931 COQ1YBR003W 1422 nt11.42□□□□□ -0.58
SSN2P38931 CUP2YGL166W 678 nt11.42□□□□□ -0.58
SSN2P38931 MSP1YGR028W 1089 nt11.42□□□□□ -0.58
SSN2P38931 YHL018WYHL018W 363 nt11.42□□□□□ -0.58
SSN2P38931 YSC83YHR017W 1158 nt11.42□□□□□ -0.58
SSN2P38931 MPC2YHR162W 390 nt11.41□□□□□ -0.58
SSN2P38931 SPE4YLR146C 903 nt11.41□□□□□ -0.58
SSN2P38931 YMR279CYMR279C 1623 nt11.41□□□□□ -0.58
SSN2P38931 ZWF1YNL241C 1518 nt11.4□□□□□ -0.58
SSN2P38931 MRPL28YDR462W 444 nt11.4□□□□□ -0.58
SSN2P38931 HIS1YER055C 894 nt11.4□□□□□ -0.58
SSN2P38931 PRC1YMR297W 1599 nt11.39□□□□□ -0.59
SSN2P38931 DID2YKR035W-A 615 nt11.39□□□□□ -0.59
SSN2P38931 CHA1YCL064C 1083 nt11.38□□□□□ -0.59
SSN2P38931 YOR200WYOR200W 399 nt11.38□□□□□ -0.59
SSN2P38931 PRY3YJL078C 2646 nt11.38□□□□□ -0.59
SSN2P38931 HEM2YGL040C 1029 nt11.37□□□□□ -0.59
SSN2P38931 SNT309YPR101W 528 nt11.37□□□□□ -0.59
SSN2P38931 PPM2YOL141W 2088 nt11.37□□□□□ -0.59
SSN2P38931 YPL102CYPL102C 303 nt11.36□□□□□ -0.59
SSN2P38931 YPR196WYPR196W 1413 nt11.36□□□□□ -0.59
SSN2P38931 UIP5YKR044W 1332 nt11.36□□□□□ -0.59
SSN2P38931 TRS31YDR472W 852 nt11.35□□□□□ -0.59
SSN2P38931 SNF4YGL115W 969 nt11.35□□□□□ -0.59
SSN2P38931 COQ3YOL096C 939 nt11.35□□□□□ -0.59
SSN2P38931 TOK1YJL093C 2076 nt11.35□□□□□ -0.59
SSN2P38931 MET2YNL277W 1461 nt11.35□□□□□ -0.59
SSN2P38931 PAC2YER007W 1557 nt11.34□□□□□ -0.59
SSN2P38931 YHK8YHR048W 1545 nt11.34□□□□□ -0.59
SSN2P38931 YHR020WYHR020W 2067 nt11.34□□□□□ -0.59
SSN2P38931 CCT8YJL008C 1707 nt11.33□□□□□ -0.6
SSN2P38931 LOT6YLR011W 576 nt11.33□□□□□ -0.6
SSN2P38931 RPS28AYOR167C 204 nt11.33□□□□□ -0.6
SSN2P38931 SGF29YCL010C 780 nt11.32□□□□□ -0.6
SSN2P38931 AIM34YMR003W 597 nt11.31□□□□□ -0.6
SSN2P38931 MSO1YNR049C 633 nt11.31□□□□□ -0.6
SSN2P38931 TMA46YOR091W 1038 nt11.31□□□□□ -0.6
SSN2P38931 TOD6YBL054W 1578 nt11.31□□□□□ -0.6
SSN2P38931 BEM1YBR200W 1656 nt11.31□□□□□ -0.6
SSN2P38931 PRB1YEL060C 1908 nt11.3□□□□□ -0.6
SSN2P38931 SEC24YIL109C 2781 nt11.3□□□□□ -0.6
SSN2P38931 YDL177CYDL177C 513 nt11.3□□□□□ -0.6
SSN2P38931 PTC3YBL056W 1407 nt11.3□□□□□ -0.6
SSN2P38931 DSF1YEL070W 1509 nt11.29□□□□□ -0.6
SSN2P38931 YNR073CYNR073C 1509 nt11.29□□□□□ -0.6
SSN2P38931 STT3YGL022W 2157 nt11.29□□□□□ -0.6
SSN2P38931 SDH4YDR178W 546 nt11.28□□□□□ -0.6
SSN2P38931 VPS24YKL041W 675 nt11.28□□□□□ -0.6
SSN2P38931 YER137CYER137C 447 nt11.27□□□□□ -0.6
SSN2P38931 tG(GCC)BtG(GCC)B 71 nt11.26□□□□□ -0.61
SSN2P38931 SUF16tG(GCC)C 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)D1tG(GCC)D1 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)D2tG(GCC)D2 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)EtG(GCC)E 71 nt11.26□□□□□ -0.61
SSN2P38931 SUF20tG(GCC)F1 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)F2tG(GCC)F2 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)G1tG(GCC)G1 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)G2tG(GCC)G2 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)J1tG(GCC)J1 71 nt11.26□□□□□ -0.61
SSN2P38931 SUF23tG(GCC)J2 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)MtG(GCC)M 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)O1tG(GCC)O1 71 nt11.26□□□□□ -0.61
SSN2P38931 SUF17tG(GCC)O2 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)P1tG(GCC)P1 71 nt11.26□□□□□ -0.61
SSN2P38931 tG(GCC)P2tG(GCC)P2 71 nt11.26□□□□□ -0.61
SSN2P38931 OGG1YML060W 1131 nt11.26□□□□□ -0.61
SSN2P38931 SFP1YLR403W 2052 nt11.26□□□□□ -0.61
SSN2P38931 HVG1YER039C 750 nt11.26□□□□□ -0.61
SSN2P38931 YNL097W-AYNL097W-A 156 nt11.26□□□□□ -0.61
SSN2P38931 PPH22YDL188C 1134 nt11.25□□□□□ -0.61
SSN2P38931 ATG36YJL185C 882 nt11.25□□□□□ -0.61
SSN2P38931 YOR012WYOR012W 414 nt11.25□□□□□ -0.61
SSN2P38931 PSR2YLR019W 1194 nt11.24□□□□□ -0.61
SSN2P38931 YLR112WYLR112W 420 nt11.24□□□□□ -0.61
SSN2P38931 MRPL10YNL284C 969 nt11.24□□□□□ -0.61
SSN2P38931 YFL013W-AYFL013W-A 804 nt11.23□□□□□ -0.61
SSN2P38931 PTC4YBR125C 1182 nt11.23□□□□□ -0.61
SSN2P38931 MHP1YJL042W 4197 nt11.22□□□□□ -0.61
SSN2P38931 ERS1YCR075C 783 nt11.22□□□□□ -0.61
SSN2P38931 IRC11YOR013W 471 nt11.21□□□□□ -0.61
SSN2P38931 YCR041WYCR041W 333 nt11.2□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 86.7 ms