Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.72■■■□□ 2.67
MS4A1P11836 ABHD17AP4-201ENST00000411545 909 ntBASIC31.72■■■□□ 2.67
MS4A1P11836 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
MS4A1P11836 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
MS4A1P11836 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.71■■■□□ 2.67
MS4A1P11836 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
MS4A1P11836 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
MS4A1P11836 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.71■■■□□ 2.67
MS4A1P11836 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
MS4A1P11836 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
MS4A1P11836 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
MS4A1P11836 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
MS4A1P11836 WHAMMP3-201ENST00000611636 1609 ntBASIC31.7■■■□□ 2.66
MS4A1P11836 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
MS4A1P11836 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.7■■■□□ 2.66
MS4A1P11836 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.66
MS4A1P11836 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
MS4A1P11836 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.69■■■□□ 2.66
MS4A1P11836 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
MS4A1P11836 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.68■■■□□ 2.66
MS4A1P11836 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.68■■■□□ 2.66
MS4A1P11836 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
MS4A1P11836 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
MS4A1P11836 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
MS4A1P11836 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
MS4A1P11836 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.67■■■□□ 2.66
MS4A1P11836 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
MS4A1P11836 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
MS4A1P11836 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.66■■■□□ 2.66
MS4A1P11836 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.66■■■□□ 2.66
MS4A1P11836 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
MS4A1P11836 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
MS4A1P11836 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
MS4A1P11836 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.65■■■□□ 2.66
MS4A1P11836 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
MS4A1P11836 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.65■■■□□ 2.66
MS4A1P11836 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
MS4A1P11836 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
MS4A1P11836 AC148477.6-201ENST00000623746 465 ntBASIC31.64■■■□□ 2.66
MS4A1P11836 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
MS4A1P11836 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
MS4A1P11836 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
MS4A1P11836 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
MS4A1P11836 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
MS4A1P11836 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.62■■■□□ 2.65
MS4A1P11836 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
MS4A1P11836 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
MS4A1P11836 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
MS4A1P11836 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.61■■■□□ 2.65
MS4A1P11836 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
MS4A1P11836 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.6■■■□□ 2.65
MS4A1P11836 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
MS4A1P11836 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
MS4A1P11836 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.6■■■□□ 2.65
MS4A1P11836 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
MS4A1P11836 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
MS4A1P11836 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.59■■■□□ 2.65
MS4A1P11836 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
MS4A1P11836 AP004609.3-201ENST00000610705 1884 ntBASIC31.59■■■□□ 2.65
MS4A1P11836 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
MS4A1P11836 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.58■■■□□ 2.65
MS4A1P11836 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
MS4A1P11836 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31.58■■■□□ 2.65
MS4A1P11836 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
MS4A1P11836 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
MS4A1P11836 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
MS4A1P11836 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
MS4A1P11836 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
MS4A1P11836 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
MS4A1P11836 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
MS4A1P11836 MIR219A2-201ENST00000608502 1504 ntBASIC31.56■■■□□ 2.64
MS4A1P11836 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
MS4A1P11836 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.56■■■□□ 2.64
MS4A1P11836 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.56■■■□□ 2.64
MS4A1P11836 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
MS4A1P11836 AC142472.1-201ENST00000612013 1741 ntBASIC31.55■■■□□ 2.64
MS4A1P11836 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
MS4A1P11836 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
MS4A1P11836 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.55■■■□□ 2.64
MS4A1P11836 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.55■■■□□ 2.64
MS4A1P11836 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
MS4A1P11836 CR559946.2-201ENST00000623684 991 ntBASIC31.54■■■□□ 2.64
MS4A1P11836 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.54■■■□□ 2.64
MS4A1P11836 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
MS4A1P11836 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
MS4A1P11836 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
MS4A1P11836 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
MS4A1P11836 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.53■■■□□ 2.64
MS4A1P11836 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
MS4A1P11836 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
MS4A1P11836 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
MS4A1P11836 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
MS4A1P11836 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.52■■■□□ 2.64
MS4A1P11836 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
MS4A1P11836 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
MS4A1P11836 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
MS4A1P11836 MIR3648-2-201ENST00000581792 180 ntBASIC31.51■■■□□ 2.63
MS4A1P11836 MIR3648-1-201ENST00000615959 180 ntBASIC31.51■■■□□ 2.63
MS4A1P11836 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
MS4A1P11836 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms