Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PF4V1P10720 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PF4V1P10720 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
PF4V1P10720 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.52■□□□□ 0.72
PF4V1P10720 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.52■□□□□ 0.72
PF4V1P10720 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PF4V1P10720 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PF4V1P10720 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PF4V1P10720 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PF4V1P10720 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PF4V1P10720 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PF4V1P10720 LINC01003-201ENST00000564834 1764 ntBASIC19.5■□□□□ 0.71
PF4V1P10720 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PF4V1P10720 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PF4V1P10720 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PF4V1P10720 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PF4V1P10720 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PF4V1P10720 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PF4V1P10720 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.48■□□□□ 0.71
PF4V1P10720 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PF4V1P10720 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.48■□□□□ 0.71
PF4V1P10720 BX255925.1-201ENST00000566954 1854 ntBASIC19.48■□□□□ 0.71
PF4V1P10720 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PF4V1P10720 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PF4V1P10720 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PF4V1P10720 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.47■□□□□ 0.71
PF4V1P10720 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PF4V1P10720 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PF4V1P10720 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PF4V1P10720 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PF4V1P10720 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.46■□□□□ 0.71
PF4V1P10720 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PF4V1P10720 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PF4V1P10720 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.46■□□□□ 0.71
PF4V1P10720 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PF4V1P10720 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PF4V1P10720 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PF4V1P10720 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PF4V1P10720 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PF4V1P10720 AL359258.2-201ENST00000564063 1566 ntBASIC19.45■□□□□ 0.7
PF4V1P10720 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PF4V1P10720 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PF4V1P10720 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PF4V1P10720 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PF4V1P10720 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PF4V1P10720 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.45■□□□□ 0.7
PF4V1P10720 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PF4V1P10720 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.45■□□□□ 0.7
PF4V1P10720 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.44■□□□□ 0.7
PF4V1P10720 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.44■□□□□ 0.7
PF4V1P10720 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.44■□□□□ 0.7
PF4V1P10720 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PF4V1P10720 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PF4V1P10720 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PF4V1P10720 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PF4V1P10720 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.43■□□□□ 0.7
PF4V1P10720 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PF4V1P10720 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PF4V1P10720 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PF4V1P10720 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PF4V1P10720 ECEL1P2-201ENST00000461596 1295 ntBASIC19.42■□□□□ 0.7
PF4V1P10720 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.42■□□□□ 0.7
PF4V1P10720 AC092296.2-201ENST00000589470 999 ntBASIC19.42■□□□□ 0.7
PF4V1P10720 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.42■□□□□ 0.7
PF4V1P10720 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PF4V1P10720 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.42■□□□□ 0.7
PF4V1P10720 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PF4V1P10720 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PF4V1P10720 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PF4V1P10720 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PF4V1P10720 WHAMMP3-201ENST00000611636 1609 ntBASIC19.4■□□□□ 0.7
PF4V1P10720 U85056.1-201ENST00000616429 682 ntBASIC19.4■□□□□ 0.7
PF4V1P10720 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PF4V1P10720 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PF4V1P10720 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PF4V1P10720 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.39■□□□□ 0.69
PF4V1P10720 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PF4V1P10720 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.39■□□□□ 0.69
PF4V1P10720 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PF4V1P10720 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PF4V1P10720 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PF4V1P10720 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PF4V1P10720 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PF4V1P10720 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PF4V1P10720 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.38■□□□□ 0.69
PF4V1P10720 AL033527.3-201ENST00000566366 1196 ntBASIC19.38■□□□□ 0.69
PF4V1P10720 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.37■□□□□ 0.69
PF4V1P10720 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PF4V1P10720 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PF4V1P10720 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.37■□□□□ 0.69
PF4V1P10720 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PF4V1P10720 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PF4V1P10720 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PF4V1P10720 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PF4V1P10720 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PF4V1P10720 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PF4V1P10720 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PF4V1P10720 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PF4V1P10720 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PF4V1P10720 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms