Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
ZNF253O75346 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.03■□□□□ 0.64
ZNF253O75346 MIR6090-201ENST00000622481 60 ntBASIC19.03■□□□□ 0.64
ZNF253O75346 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF253O75346 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF253O75346 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF253O75346 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF253O75346 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF253O75346 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF253O75346 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF253O75346 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF253O75346 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF253O75346 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF253O75346 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF253O75346 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF253O75346 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF253O75346 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF253O75346 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF253O75346 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF253O75346 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF253O75346 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19■□□□□ 0.63
ZNF253O75346 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19■□□□□ 0.63
ZNF253O75346 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19■□□□□ 0.63
ZNF253O75346 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZNF253O75346 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF253O75346 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZNF253O75346 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF253O75346 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
ZNF253O75346 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZNF253O75346 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF253O75346 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF253O75346 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ZNF253O75346 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF253O75346 AC091060.1-201ENST00000623524 1766 ntBASIC18.99■□□□□ 0.63
ZNF253O75346 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZNF253O75346 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF253O75346 MIR3665-201ENST00000578708 105 ntBASIC18.99■□□□□ 0.63
ZNF253O75346 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF253O75346 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF253O75346 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF253O75346 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF253O75346 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF253O75346 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZNF253O75346 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF253O75346 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF253O75346 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF253O75346 DUX4L28-201ENST00000623687 678 ntBASIC18.98■□□□□ 0.63
ZNF253O75346 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF253O75346 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.98■□□□□ 0.63
ZNF253O75346 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF253O75346 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ZNF253O75346 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
ZNF253O75346 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
ZNF253O75346 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF253O75346 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF253O75346 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.96■□□□□ 0.63
ZNF253O75346 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF253O75346 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF253O75346 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ZNF253O75346 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF253O75346 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF253O75346 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF253O75346 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.95■□□□□ 0.62
ZNF253O75346 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF253O75346 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF253O75346 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF253O75346 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF253O75346 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF253O75346 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF253O75346 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
ZNF253O75346 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ZNF253O75346 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF253O75346 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF253O75346 AP006261.1-201ENST00000584783 668 ntBASIC18.93■□□□□ 0.62
ZNF253O75346 AC145676.1-201ENST00000514988 2004 ntBASIC18.93■□□□□ 0.62
ZNF253O75346 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF253O75346 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF253O75346 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF253O75346 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF253O75346 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF253O75346 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.92■□□□□ 0.62
ZNF253O75346 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF253O75346 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF253O75346 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF253O75346 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ZNF253O75346 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF253O75346 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF253O75346 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF253O75346 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF253O75346 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF253O75346 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF253O75346 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ZNF253O75346 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF253O75346 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF253O75346 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF253O75346 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF253O75346 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF253O75346 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF253O75346 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF253O75346 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms