Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 DUX4L25-201ENST00000624915 1269 ntBASIC22.93■■□□□ 1.26
AP3D1O14617 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
AP3D1O14617 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.93■■□□□ 1.26
AP3D1O14617 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.92■■□□□ 1.26
AP3D1O14617 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.92■■□□□ 1.26
AP3D1O14617 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
AP3D1O14617 ABHD17AP4-201ENST00000411545 909 ntBASIC22.92■■□□□ 1.26
AP3D1O14617 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.92■■□□□ 1.26
AP3D1O14617 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
AP3D1O14617 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
AP3D1O14617 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
AP3D1O14617 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
AP3D1O14617 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.91■■□□□ 1.26
AP3D1O14617 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
AP3D1O14617 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
AP3D1O14617 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
AP3D1O14617 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
AP3D1O14617 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
AP3D1O14617 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.9■■□□□ 1.26
AP3D1O14617 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
AP3D1O14617 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
AP3D1O14617 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.9■■□□□ 1.26
AP3D1O14617 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
AP3D1O14617 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.89■■□□□ 1.26
AP3D1O14617 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
AP3D1O14617 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
AP3D1O14617 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
AP3D1O14617 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
AP3D1O14617 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
AP3D1O14617 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
AP3D1O14617 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.88■■□□□ 1.25
AP3D1O14617 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
AP3D1O14617 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
AP3D1O14617 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.87■■□□□ 1.25
AP3D1O14617 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.87■■□□□ 1.25
AP3D1O14617 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
AP3D1O14617 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.87■■□□□ 1.25
AP3D1O14617 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
AP3D1O14617 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
AP3D1O14617 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
AP3D1O14617 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
AP3D1O14617 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
AP3D1O14617 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.85■■□□□ 1.25
AP3D1O14617 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.85■■□□□ 1.25
AP3D1O14617 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.85■■□□□ 1.25
AP3D1O14617 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
AP3D1O14617 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
AP3D1O14617 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
AP3D1O14617 AL449106.1-201ENST00000608517 1980 ntBASIC22.83■■□□□ 1.25
AP3D1O14617 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.83■■□□□ 1.25
AP3D1O14617 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.83■■□□□ 1.25
AP3D1O14617 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
AP3D1O14617 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
AP3D1O14617 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
AP3D1O14617 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
AP3D1O14617 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
AP3D1O14617 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
AP3D1O14617 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.82■■□□□ 1.24
AP3D1O14617 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.81■■□□□ 1.24
AP3D1O14617 AP004609.3-201ENST00000610705 1884 ntBASIC22.81■■□□□ 1.24
AP3D1O14617 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
AP3D1O14617 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
AP3D1O14617 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
AP3D1O14617 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
AP3D1O14617 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
AP3D1O14617 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
AP3D1O14617 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.8■■□□□ 1.24
AP3D1O14617 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.8■■□□□ 1.24
AP3D1O14617 AC091060.1-201ENST00000623524 1766 ntBASIC22.8■■□□□ 1.24
AP3D1O14617 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
AP3D1O14617 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
AP3D1O14617 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
AP3D1O14617 CR559946.2-201ENST00000623684 991 ntBASIC22.79■■□□□ 1.24
AP3D1O14617 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.79■■□□□ 1.24
AP3D1O14617 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
AP3D1O14617 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
AP3D1O14617 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
AP3D1O14617 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.78■■□□□ 1.24
AP3D1O14617 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
AP3D1O14617 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
AP3D1O14617 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
AP3D1O14617 WHAMMP3-201ENST00000611636 1609 ntBASIC22.76■■□□□ 1.23
AP3D1O14617 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
AP3D1O14617 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
AP3D1O14617 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
AP3D1O14617 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.76■■□□□ 1.23
AP3D1O14617 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
AP3D1O14617 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
AP3D1O14617 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
AP3D1O14617 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.75■■□□□ 1.23
AP3D1O14617 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
AP3D1O14617 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
AP3D1O14617 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
AP3D1O14617 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.75■■□□□ 1.23
AP3D1O14617 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
AP3D1O14617 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
AP3D1O14617 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
AP3D1O14617 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.74■■□□□ 1.23
AP3D1O14617 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
AP3D1O14617 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms