Protein–RNA interactions for Protein: Q9Y6U7

RNF215, RING finger protein 215, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF215Q9Y6U7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 AL662844.1-201ENST00000546340 181 ntBASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF215Q9Y6U7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 MTCL1P1-201ENST00000446207 792 ntBASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF215Q9Y6U7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 RCN1P2-201ENST00000398357 915 ntBASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 AL022342.1-201ENST00000400363 863 ntBASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 TP73-AS1-207ENST00000624167 988 ntBASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF215Q9Y6U7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF215Q9Y6U7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RNF215Q9Y6U7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RNF215Q9Y6U7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms