Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 AP002414.4-201ENST00000589764 1148 ntBASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 AC092329.2-201ENST00000598402 547 ntBASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 AC005332.8-201ENST00000622750 2735 ntBASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 TPSP2-201ENST00000561760 610 ntBASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 AC011840.4-201ENST00000578471 627 ntBASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNMT3AQ9Y6K1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 AC135776.1-201ENST00000319817 2481 ntBASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 MTCL1P1-201ENST00000446207 792 ntBASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 VENTXP7-201ENST00000475503 772 ntBASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 AL096828.2-201ENST00000567259 1965 ntBASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DNMT3AQ9Y6K1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms