Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 AC073592.3-201ENST00000625118 1834 ntBASIC18.86■□□□□ 0.61
YIPF1Q9Y548 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
YIPF1Q9Y548 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 AC093010.1-201ENST00000473625 1624 ntBASIC18.85■□□□□ 0.61
YIPF1Q9Y548 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 IL9RP2-201ENST00000423948 1312 ntBASIC18.85■□□□□ 0.61
YIPF1Q9Y548 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 ABCD1P5-201ENST00000445663 754 ntBASIC18.85■□□□□ 0.61
YIPF1Q9Y548 RNPS1P1-201ENST00000507437 918 ntBASIC18.85■□□□□ 0.61
YIPF1Q9Y548 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 MIR7706-201ENST00000613747 67 ntBASIC18.85■□□□□ 0.61
YIPF1Q9Y548 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 PHGDH-209ENST00000641074 1780 ntBASIC18.85■□□□□ 0.61
YIPF1Q9Y548 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
YIPF1Q9Y548 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 AP005117.1-201ENST00000584346 1413 ntBASIC18.84■□□□□ 0.61
YIPF1Q9Y548 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 SCARNA2-201ENST00000458748 420 ntBASIC18.84■□□□□ 0.61
YIPF1Q9Y548 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
YIPF1Q9Y548 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
YIPF1Q9Y548 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms