Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 IER3-202ENST00000376377 1350 ntBASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 AC009113.1-201ENST00000570267 2443 ntBASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 SDHAP2-201ENST00000455183 2001 ntBASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 AC104581.1-202ENST00000635932 2618 ntBASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 AL645929.1-201ENST00000420084 975 ntBASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 HLA-F-220ENST00000434407 884 ntBASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 AL136038.3-201ENST00000561909 1096 ntBASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RPH3AQ9Y2J0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.61■□□□□ 0.25
RPH3AQ9Y2J0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms