Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 NSUN5P2-203ENST00000457352 1529 ntBASIC14□□□□□ -0.17
NOTCH3Q9UM47 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14□□□□□ -0.17
NOTCH3Q9UM47 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14□□□□□ -0.17
NOTCH3Q9UM47 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NOTCH3Q9UM47 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NOTCH3Q9UM47 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14□□□□□ -0.17
NOTCH3Q9UM47 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NOTCH3Q9UM47 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NOTCH3Q9UM47 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NOTCH3Q9UM47 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 SAPCD2P3-201ENST00000455031 850 ntBASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 TP73-AS1-207ENST00000624167 988 ntBASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NOTCH3Q9UM47 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 KRT18P13-201ENST00000400056 1290 ntBASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 IRX1P1-201ENST00000438849 1838 ntBASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.98□□□□□ -0.17
NOTCH3Q9UM47 AC148477.8-201ENST00000624298 468 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms