Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SIX4Q9UIU6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 AP000867.3-201ENST00000524675 377 ntBASIC19.34■□□□□ 0.69
SIX4Q9UIU6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX4Q9UIU6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 KRT8P47-201ENST00000604727 1398 ntBASIC19.33■□□□□ 0.69
SIX4Q9UIU6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SIX4Q9UIU6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 IGHV3-47-201ENST00000425060 335 ntBASIC19.33■□□□□ 0.68
SIX4Q9UIU6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 AC011840.4-201ENST00000578471 627 ntBASIC19.33■□□□□ 0.68
SIX4Q9UIU6 CLEC4GP1-201ENST00000596555 870 ntBASIC19.33■□□□□ 0.68
SIX4Q9UIU6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.33■□□□□ 0.68
SIX4Q9UIU6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 AC100803.2-201ENST00000562459 1963 ntBASIC19.32■□□□□ 0.68
SIX4Q9UIU6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 KRT17P6-201ENST00000453795 1220 ntBASIC19.32■□□□□ 0.68
SIX4Q9UIU6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 AC012313.10-201ENST00000623509 926 ntBASIC19.32■□□□□ 0.68
SIX4Q9UIU6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX4Q9UIU6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms