Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 AC190387.1-201ENST00000551683 408 ntBASIC19.11■□□□□ 0.65
CHD7Q9P2D1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 AC109322.1-201ENST00000524499 1264 ntBASIC19.1■□□□□ 0.65
CHD7Q9P2D1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 AC005593.1-201ENST00000624894 515 ntBASIC19.1■□□□□ 0.65
CHD7Q9P2D1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHD7Q9P2D1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 Z92544.3-201ENST00000624747 417 ntBASIC19.09■□□□□ 0.65
CHD7Q9P2D1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 AP000344.2-201ENST00000512987 629 ntBASIC19.09■□□□□ 0.65
CHD7Q9P2D1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHD7Q9P2D1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 VN2R19P-201ENST00000442399 1052 ntBASIC19.08■□□□□ 0.65
CHD7Q9P2D1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHD7Q9P2D1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.08■□□□□ 0.64
CHD7Q9P2D1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 KRT19P2-202ENST00000557173 1012 ntBASIC19.07■□□□□ 0.64
CHD7Q9P2D1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms