Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 POM121L3P-201ENST00000419331 1163 ntBASIC19.45■□□□□ 0.7
CNTN3Q9P232 TPM4P1-201ENST00000436100 807 ntBASIC19.45■□□□□ 0.7
CNTN3Q9P232 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 RN7SL510P-201ENST00000581311 263 ntBASIC19.45■□□□□ 0.7
CNTN3Q9P232 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 AL138831.2-201ENST00000606564 490 ntBASIC19.45■□□□□ 0.7
CNTN3Q9P232 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.45■□□□□ 0.7
CNTN3Q9P232 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNTN3Q9P232 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNTN3Q9P232 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.44■□□□□ 0.7
CNTN3Q9P232 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 AL096828.2-201ENST00000567259 1965 ntBASIC19.43■□□□□ 0.7
CNTN3Q9P232 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 KRT16P4-201ENST00000453883 522 ntBASIC19.43■□□□□ 0.7
CNTN3Q9P232 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 DUTP2-201ENST00000519164 463 ntBASIC19.43■□□□□ 0.7
CNTN3Q9P232 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.43■□□□□ 0.7
CNTN3Q9P232 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 AC114341.1-201ENST00000618070 349 ntBASIC19.43■□□□□ 0.7
CNTN3Q9P232 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CNTN3Q9P232 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNTN3Q9P232 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 AC125634.1-201ENST00000438758 1403 ntBASIC19.42■□□□□ 0.7
CNTN3Q9P232 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms