Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.43■□□□□ 0.86
COL20A1Q9P218 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COL20A1Q9P218 AL096828.2-201ENST00000567259 1965 ntBASIC20.43■□□□□ 0.86
COL20A1Q9P218 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.43■□□□□ 0.86
COL20A1Q9P218 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.43■□□□□ 0.86
COL20A1Q9P218 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.43■□□□□ 0.86
COL20A1Q9P218 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.43■□□□□ 0.86
COL20A1Q9P218 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.43■□□□□ 0.86
COL20A1Q9P218 AC148477.8-201ENST00000624298 468 ntBASIC20.43■□□□□ 0.86
COL20A1Q9P218 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 HLA-A-201ENST00000376802 1334 ntBASIC20.43■□□□□ 0.86
COL20A1Q9P218 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 AL138781.2-201ENST00000617896 1843 ntBASIC20.43■□□□□ 0.86
COL20A1Q9P218 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.43■□□□□ 0.86
COL20A1Q9P218 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COL20A1Q9P218 AC135776.1-201ENST00000319817 2481 ntBASIC20.43■□□□□ 0.86
COL20A1Q9P218 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL20A1Q9P218 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.42■□□□□ 0.86
COL20A1Q9P218 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.42■□□□□ 0.86
COL20A1Q9P218 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.42■□□□□ 0.86
COL20A1Q9P218 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.42■□□□□ 0.86
COL20A1Q9P218 AC008608.2-201ENST00000606089 416 ntBASIC20.42■□□□□ 0.86
COL20A1Q9P218 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.42■□□□□ 0.86
COL20A1Q9P218 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.42■□□□□ 0.86
COL20A1Q9P218 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.42■□□□□ 0.86
COL20A1Q9P218 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL20A1Q9P218 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.42■□□□□ 0.86
COL20A1Q9P218 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL20A1Q9P218 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 FGFR3P6-201ENST00000457012 610 ntBASIC20.41■□□□□ 0.86
COL20A1Q9P218 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COL20A1Q9P218 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL20A1Q9P218 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL20A1Q9P218 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.4■□□□□ 0.86
COL20A1Q9P218 AL355877.3-201ENST00000622820 899 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms