Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 AC022898.2-201ENST00000616822 1312 ntBASIC25.83■■□□□ 1.73
SLC52A1Q9NWF4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
SLC52A1Q9NWF4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 GMCL1P1-201ENST00000463439 1581 ntBASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 AC103564.2-201ENST00000432853 1299 ntBASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SLC52A1Q9NWF4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 LBH-203ENST00000404397 543 ntTSL 4 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC25.81■■□□□ 1.72
SLC52A1Q9NWF4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 AC004706.3-202ENST00000621574 984 ntBASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
SLC52A1Q9NWF4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 AC005829.1-201ENST00000570002 483 ntBASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 AC002310.6-201ENST00000624451 1377 ntBASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC52A1Q9NWF4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 COX5BP2-201ENST00000392354 334 ntBASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SLC52A1Q9NWF4 AC005082.1-201ENST00000413042 2259 ntBASIC25.77■■□□□ 1.72
SLC52A1Q9NWF4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC52A1Q9NWF4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC52A1Q9NWF4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC25.77■■□□□ 1.72
SLC52A1Q9NWF4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms