Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.02■□□□□ 0.96
RBM28Q9NW13 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RBM28Q9NW13 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.02■□□□□ 0.95
RBM28Q9NW13 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.02■□□□□ 0.95
RBM28Q9NW13 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 AP000550.4-202ENST00000639755 178 ntBASIC21.01■□□□□ 0.95
RBM28Q9NW13 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 AC026471.1-201ENST00000564629 3026 ntBASIC21.01■□□□□ 0.95
RBM28Q9NW13 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RBM28Q9NW13 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.01■□□□□ 0.95
RBM28Q9NW13 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
RBM28Q9NW13 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21■□□□□ 0.95
RBM28Q9NW13 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBM28Q9NW13 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RBM28Q9NW13 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21■□□□□ 0.95
RBM28Q9NW13 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21■□□□□ 0.95
RBM28Q9NW13 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21■□□□□ 0.95
RBM28Q9NW13 KRT8P26-201ENST00000534154 1276 ntBASIC21■□□□□ 0.95
RBM28Q9NW13 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21■□□□□ 0.95
RBM28Q9NW13 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBM28Q9NW13 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RBM28Q9NW13 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBM28Q9NW13 LETM1P2-201ENST00000597330 2178 ntBASIC21■□□□□ 0.95
RBM28Q9NW13 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBM28Q9NW13 AC022898.2-201ENST00000616822 1312 ntBASIC21■□□□□ 0.95
RBM28Q9NW13 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RBM28Q9NW13 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 AC091076.1-201ENST00000610741 619 ntBASIC20.99■□□□□ 0.95
RBM28Q9NW13 AL358472.4-201ENST00000633140 710 ntBASIC20.99■□□□□ 0.95
RBM28Q9NW13 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.99■□□□□ 0.95
RBM28Q9NW13 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBM28Q9NW13 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBM28Q9NW13 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 AL121672.3-201ENST00000608644 468 ntBASIC20.98■□□□□ 0.95
RBM28Q9NW13 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.98■□□□□ 0.95
RBM28Q9NW13 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms