Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB16Q9NRJ7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB16Q9NRJ7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHB16Q9NRJ7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB16Q9NRJ7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB16Q9NRJ7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHB16Q9NRJ7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB16Q9NRJ7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 PRORSD1P-201ENST00000295112 541 ntBASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 UBE2SP1-201ENST00000450587 669 ntBASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 AC142381.4-202ENST00000563973 229 ntBASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHB16Q9NRJ7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 CICP6-201ENST00000457191 2729 ntBASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 AC034236.2-201ENST00000606662 1610 ntBASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 MIR564-202ENST00000385049 94 ntBASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 MCCD1P1-208ENST00000445732 328 ntBASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 B3GAT3P1-201ENST00000471720 806 ntBASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 DGCR10-201ENST00000609839 495 ntBASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 AL359736.2-201ENST00000621992 437 ntBASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHB16Q9NRJ7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 AC008556.1-201ENST00000610908 2040 ntBASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
PCDHB16Q9NRJ7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHB16Q9NRJ7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms