Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC52A3Q9NQ40 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 AL121761.2-201ENST00000598007 1648 ntBASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 AC012618.2-201ENST00000428058 849 ntBASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 AC010240.3-201ENST00000607688 395 ntBASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 AL049637.2-201ENST00000641778 930 ntBASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC52A3Q9NQ40 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 PRORSD1P-201ENST00000295112 541 ntBASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 AC106820.2-201ENST00000563775 3264 ntBASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 REXO1L11P-201ENST00000620964 1927 ntBASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC52A3Q9NQ40 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 HLA-J-201ENST00000462773 1622 ntBASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 AC066615.1-201ENST00000640911 628 ntBASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC52A3Q9NQ40 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms