Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 SEC1P-202ENST00000473944 940 ntBASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 AC145285.6-201ENST00000604632 637 ntBASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 PCDHB18P-201ENST00000524813 2368 ntBASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 LINC01126-201ENST00000623515 1646 ntBASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 KRT8P9-201ENST00000558927 1449 ntBASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 AC067852.2-201ENST00000590513 2313 ntBASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEUROD4Q9HD90 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 AC134043.2-201ENST00000624206 2238 ntBASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 AP000997.3-201ENST00000623333 2250 ntBASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NEUROD4Q9HD90 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.11■□□□□ 0.33
NEUROD4Q9HD90 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NEUROD4Q9HD90 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms