Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.15■□□□□ 0.5
ZFYVE1Q9HBF4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZFYVE1Q9HBF4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
ZFYVE1Q9HBF4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.14■□□□□ 0.5
ZFYVE1Q9HBF4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 AL390719.2-201ENST00000606993 987 ntBASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 AL358472.4-201ENST00000633140 710 ntBASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 IER3-202ENST00000376377 1350 ntBASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 AL353692.3-201ENST00000407031 1396 ntBASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 AL354751.1-201ENST00000412768 1863 ntBASIC18.14■□□□□ 0.49
ZFYVE1Q9HBF4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 AC091076.1-201ENST00000610741 619 ntBASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 AP000550.4-202ENST00000639755 178 ntBASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 LINC00167-201ENST00000530583 1419 ntBASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ZFYVE1Q9HBF4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 TSPY22P-201ENST00000427496 604 ntBASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.12■□□□□ 0.49
ZFYVE1Q9HBF4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms