Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 MIR3197-201ENST00000582241 73 ntBASIC21.06■□□□□ 0.96
EFCC1Q9HA90 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.06■□□□□ 0.96
EFCC1Q9HA90 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 NEFHP1-201ENST00000412845 2629 ntBASIC21.05■□□□□ 0.96
EFCC1Q9HA90 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 AC040169.1-201ENST00000565382 521 ntBASIC21.05■□□□□ 0.96
EFCC1Q9HA90 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 AIRN-201ENST00000601203 4374 ntBASIC21.05■□□□□ 0.96
EFCC1Q9HA90 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EFCC1Q9HA90 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.04■□□□□ 0.96
EFCC1Q9HA90 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 HEIH-201ENST00000623091 1652 ntBASIC21.03■□□□□ 0.96
EFCC1Q9HA90 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 Z83851.2-201ENST00000609564 659 ntBASIC21.03■□□□□ 0.96
EFCC1Q9HA90 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 AC120498.9-201ENST00000339021 3867 ntBASIC21.03■□□□□ 0.96
EFCC1Q9HA90 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
EFCC1Q9HA90 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EFCC1Q9HA90 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.02■□□□□ 0.96
EFCC1Q9HA90 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.02■□□□□ 0.96
EFCC1Q9HA90 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
EFCC1Q9HA90 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms