Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC012313.1-201ENST00000593393 3059 ntBASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 KRT18P1-202ENST00000452408 1331 ntBASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1BQ9H9Y6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 AL023284.2-201ENST00000405850 579 ntBASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 LINC01711-201ENST00000598340 967 ntBASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLR1BQ9H9Y6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 TSPY22P-201ENST00000427496 604 ntBASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 HLA-F-220ENST00000434407 884 ntBASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 SEC1P-202ENST00000473944 940 ntBASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 MIR3180-5-201ENST00000583743 153 ntBASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 AL121772.3-201ENST00000610840 674 ntBASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
POLR1BQ9H9Y6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 TSPY19P-201ENST00000418461 509 ntBASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 TSPY18P-201ENST00000441642 509 ntBASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 MCCD1P1-208ENST00000445732 328 ntBASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 AC079602.3-201ENST00000623931 403 ntBASIC17.92■□□□□ 0.46
POLR1BQ9H9Y6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms