Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM7Q9C029 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM7Q9C029 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
TRIM7Q9C029 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM7Q9C029 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM7Q9C029 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM7Q9C029 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM7Q9C029 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM7Q9C029 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM7Q9C029 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM7Q9C029 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM7Q9C029 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM7Q9C029 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM7Q9C029 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM7Q9C029 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 KRT8P7-201ENST00000533003 1432 ntBASIC19.27■□□□□ 0.68
TRIM7Q9C029 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.27■□□□□ 0.68
TRIM7Q9C029 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.27■□□□□ 0.68
TRIM7Q9C029 AC024243.1-201ENST00000609234 778 ntBASIC19.27■□□□□ 0.68
TRIM7Q9C029 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM7Q9C029 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.27■□□□□ 0.67
TRIM7Q9C029 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM7Q9C029 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM7Q9C029 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM7Q9C029 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM7Q9C029 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM7Q9C029 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRIM7Q9C029 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM7Q9C029 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM7Q9C029 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 AC087499.1-201ENST00000418141 1075 ntBASIC19.26■□□□□ 0.67
TRIM7Q9C029 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM7Q9C029 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM7Q9C029 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 LINC01568-207ENST00000641790 1380 ntBASIC19.26■□□□□ 0.67
TRIM7Q9C029 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 AL024508.2-201ENST00000607749 1894 ntBASIC19.26■□□□□ 0.67
TRIM7Q9C029 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM7Q9C029 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM7Q9C029 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM7Q9C029 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
TRIM7Q9C029 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM7Q9C029 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM7Q9C029 AC128688.1-201ENST00000487626 519 ntBASIC19.25■□□□□ 0.67
TRIM7Q9C029 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.25■□□□□ 0.67
TRIM7Q9C029 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM7Q9C029 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms