Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 AC134684.3-201ENST00000641758 218 ntBASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 AC073621.1-201ENST00000392730 636 ntBASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 AC007967.2-201ENST00000432613 625 ntBASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 AC002347.1-201ENST00000569543 541 ntBASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 AL022326.1-202ENST00000641533 845 ntBASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 AC079781.4-201ENST00000641908 219 ntBASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RTFDC1Q9BY42 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 PRYP5-201ENST00000451909 266 ntBASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 AC027796.2-201ENST00000575326 344 ntBASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RTFDC1Q9BY42 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 BX005266.1-201ENST00000473402 457 ntBASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 AD001527.2-201ENST00000622994 785 ntBASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTFDC1Q9BY42 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTFDC1Q9BY42 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTFDC1Q9BY42 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RTFDC1Q9BY42 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RTFDC1Q9BY42 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 AC096633.1-201ENST00000422446 749 ntBASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 RPS8P6-201ENST00000426177 609 ntBASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
RTFDC1Q9BY42 MTDHP5-201ENST00000598980 586 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms