Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NIPSNAP3BQ9BS92 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NIPSNAP3BQ9BS92 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NIPSNAP3BQ9BS92 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NIPSNAP3BQ9BS92 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NIPSNAP3BQ9BS92 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 AL596257.1-201ENST00000641463 2694 ntBASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPSNAP3BQ9BS92 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 KRT18P6-201ENST00000555540 1265 ntBASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.51□□□□□ -0.09
NIPSNAP3BQ9BS92 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 LINC00602-201ENST00000629776 2065 ntBASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 CD99P1-205ENST00000527459 561 ntBASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.5□□□□□ -0.09
NIPSNAP3BQ9BS92 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms