Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.93■□□□□ 0.3
MS4A4EQ96PG1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 STARP1-201ENST00000397973 869 ntBASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 KRT18P57-201ENST00000443599 1254 ntBASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 AC139887.4-201ENST00000607877 719 ntBASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.92■□□□□ 0.3
MS4A4EQ96PG1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 SPDYE15P-201ENST00000424157 909 ntBASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 AC117947.1-201ENST00000427448 529 ntBASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 AL136038.4-201ENST00000603606 1261 ntBASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 AC011558.1-201ENST00000623459 338 ntBASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.91■□□□□ 0.3
MS4A4EQ96PG1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 AC132938.6-201ENST00000623828 1655 ntBASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MS4A4EQ96PG1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms