Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 AP000593.1-201ENST00000393668 712 ntBASIC18.68■□□□□ 0.58
C9orf72Q96LT7 AC097488.1-201ENST00000507834 756 ntBASIC18.68■□□□□ 0.58
C9orf72Q96LT7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 KRT18P22-201ENST00000402024 1347 ntBASIC18.68■□□□□ 0.58
C9orf72Q96LT7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 AP000692.2-201ENST00000608391 879 ntBASIC18.67■□□□□ 0.58
C9orf72Q96LT7 AC010331.1-201ENST00000611423 582 ntBASIC18.67■□□□□ 0.58
C9orf72Q96LT7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
C9orf72Q96LT7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 PP12613-201ENST00000424958 2230 ntBASIC18.66■□□□□ 0.58
C9orf72Q96LT7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 CRYGFP-201ENST00000418459 633 ntBASIC18.66■□□□□ 0.58
C9orf72Q96LT7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 MCCD1P1-208ENST00000445732 328 ntBASIC18.66■□□□□ 0.58
C9orf72Q96LT7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 C2orf69P3-201ENST00000565542 1120 ntBASIC18.66■□□□□ 0.58
C9orf72Q96LT7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 AC080080.1-201ENST00000625121 2420 ntBASIC18.66■□□□□ 0.58
C9orf72Q96LT7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
C9orf72Q96LT7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 PCDHA12-202ENST00000613593 2588 ntBASIC18.65■□□□□ 0.58
C9orf72Q96LT7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 AC034236.2-201ENST00000606662 1610 ntBASIC18.65■□□□□ 0.58
C9orf72Q96LT7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 TMPOP1-202ENST00000424642 1267 ntBASIC18.65■□□□□ 0.58
C9orf72Q96LT7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 RN7SL850P-201ENST00000579959 291 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms