Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 BX276092.2-201ENST00000417668 665 ntBASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 KRT18P5-201ENST00000436075 1291 ntBASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDLIM2Q96JY6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PDLIM2Q96JY6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDLIM2Q96JY6 AC022188.1-201ENST00000620960 1664 ntBASIC20■□□□□ 0.79
PDLIM2Q96JY6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 AC009102.3-201ENST00000623118 1491 ntBASIC20■□□□□ 0.79
PDLIM2Q96JY6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20■□□□□ 0.79
PDLIM2Q96JY6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 AC005915.1-201ENST00000624912 2018 ntBASIC20■□□□□ 0.79
PDLIM2Q96JY6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDLIM2Q96JY6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 AC116353.5-201ENST00000638148 1699 ntBASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms