Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 AL391807.1-203ENST00000604392 2365 ntBASIC21.06■□□□□ 0.96
PGBD1Q96JS3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 SLC25A6P5-201ENST00000435663 894 ntBASIC21.06■□□□□ 0.96
PGBD1Q96JS3 FAM86EP-206ENST00000510506 987 ntBASIC21.06■□□□□ 0.96
PGBD1Q96JS3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 AL136038.4-201ENST00000603606 1261 ntBASIC21.06■□□□□ 0.96
PGBD1Q96JS3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 AL358472.4-201ENST00000633140 710 ntBASIC21.06■□□□□ 0.96
PGBD1Q96JS3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 AL096828.2-201ENST00000567259 1965 ntBASIC21.06■□□□□ 0.96
PGBD1Q96JS3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PGBD1Q96JS3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 ZNF444P1-201ENST00000559497 298 ntBASIC21.05■□□□□ 0.96
PGBD1Q96JS3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PGBD1Q96JS3 PHGDH-209ENST00000641074 1780 ntBASIC21.05■□□□□ 0.96
PGBD1Q96JS3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PGBD1Q96JS3 AC005332.1-201ENST00000577698 1310 ntBASIC21.04■□□□□ 0.96
PGBD1Q96JS3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 GNAS-203ENST00000306120 1878 ntBASIC21.03■□□□□ 0.96
PGBD1Q96JS3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 AP000593.1-201ENST00000393668 712 ntBASIC21.03■□□□□ 0.96
PGBD1Q96JS3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.03■□□□□ 0.96
PGBD1Q96JS3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms