Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TRIM11Q96F44 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM11Q96F44 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 AC141257.4-201ENST00000634557 245 ntBASIC19.18■□□□□ 0.66
TRIM11Q96F44 AC136944.6-201ENST00000634818 245 ntBASIC19.18■□□□□ 0.66
TRIM11Q96F44 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRIM11Q96F44 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM11Q96F44 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRIM11Q96F44 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM11Q96F44 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
TRIM11Q96F44 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRIM11Q96F44 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM11Q96F44 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM11Q96F44 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TRIM11Q96F44 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM11Q96F44 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM11Q96F44 AL157888.1-201ENST00000631930 593 ntBASIC19.16■□□□□ 0.66
TRIM11Q96F44 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 AC022898.2-201ENST00000616822 1312 ntBASIC19.16■□□□□ 0.66
TRIM11Q96F44 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM11Q96F44 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM11Q96F44 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRIM11Q96F44 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM11Q96F44 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM11Q96F44 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM11Q96F44 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM11Q96F44 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
TRIM11Q96F44 AC087499.1-201ENST00000418141 1075 ntBASIC19.15■□□□□ 0.66
TRIM11Q96F44 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms