Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 AC090616.6-201ENST00000582640 721 ntBASIC16.05■□□□□ 0.16
APH1AQ96BI3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.05■□□□□ 0.16
APH1AQ96BI3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
APH1AQ96BI3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
APH1AQ96BI3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 LINC00602-201ENST00000629776 2065 ntBASIC16.04■□□□□ 0.16
APH1AQ96BI3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 TSPY12P-201ENST00000421279 868 ntBASIC16.04■□□□□ 0.16
APH1AQ96BI3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 GUSBP12-201ENST00000513727 720 ntBASIC16.04■□□□□ 0.16
APH1AQ96BI3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.04■□□□□ 0.16
APH1AQ96BI3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.04■□□□□ 0.16
APH1AQ96BI3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1AQ96BI3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 PHGDH-209ENST00000641074 1780 ntBASIC16.03■□□□□ 0.16
APH1AQ96BI3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 AC016734.2-201ENST00000624325 1377 ntBASIC16.03■□□□□ 0.16
APH1AQ96BI3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 IGHV3-41-201ENST00000613121 348 ntBASIC16.03■□□□□ 0.16
APH1AQ96BI3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
APH1AQ96BI3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1AQ96BI3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1AQ96BI3 AC104581.1-202ENST00000635932 2618 ntBASIC16.02■□□□□ 0.16
APH1AQ96BI3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APH1AQ96BI3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APH1AQ96BI3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms