Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CD99P1-205ENST00000527459 561 ntBASIC17.44■□□□□ 0.38
VPS33AQ96AX1 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
VPS33AQ96AX1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 CD177P1-201ENST00000606252 935 ntBASIC17.43■□□□□ 0.38
VPS33AQ96AX1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 AC009102.3-201ENST00000623118 1491 ntBASIC17.43■□□□□ 0.38
VPS33AQ96AX1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 AC141586.5-201ENST00000624546 2050 ntBASIC17.43■□□□□ 0.38
VPS33AQ96AX1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VPS33AQ96AX1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 MIR4674-201ENST00000582457 87 ntBASIC17.42■□□□□ 0.38
VPS33AQ96AX1 MIR3180-5-201ENST00000583743 153 ntBASIC17.42■□□□□ 0.38
VPS33AQ96AX1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 SIRPAP1-201ENST00000448467 1770 ntBASIC17.42■□□□□ 0.38
VPS33AQ96AX1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS33AQ96AX1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 AC036111.1-201ENST00000533973 1582 ntBASIC17.41■□□□□ 0.38
VPS33AQ96AX1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms