Protein–RNA interactions for Protein: Q95460

MR1, Major histocompatibility complex class I-related gene protein, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MR1Q95460 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.06■□□□□ 0.32
MR1Q95460 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.06■□□□□ 0.32
MR1Q95460 AF238378.1-201ENST00000526806 358 ntBASIC17.06■□□□□ 0.32
MR1Q95460 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.06■□□□□ 0.32
MR1Q95460 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MR1Q95460 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 AC114341.1-201ENST00000618070 349 ntBASIC17.06■□□□□ 0.32
MR1Q95460 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
MR1Q95460 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.06■□□□□ 0.32
MR1Q95460 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.06■□□□□ 0.32
MR1Q95460 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MR1Q95460 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
MR1Q95460 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MR1Q95460 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
MR1Q95460 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MR1Q95460 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.05■□□□□ 0.32
MR1Q95460 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.05■□□□□ 0.32
MR1Q95460 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MR1Q95460 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MR1Q95460 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.05■□□□□ 0.32
MR1Q95460 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MR1Q95460 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MR1Q95460 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.05■□□□□ 0.32
MR1Q95460 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MR1Q95460 MTCL1P1-201ENST00000446207 792 ntBASIC17.05■□□□□ 0.32
MR1Q95460 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.05■□□□□ 0.32
MR1Q95460 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.05■□□□□ 0.32
MR1Q95460 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.05■□□□□ 0.32
MR1Q95460 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MR1Q95460 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MR1Q95460 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MR1Q95460 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.04■□□□□ 0.32
MR1Q95460 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MR1Q95460 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MR1Q95460 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.04■□□□□ 0.32
MR1Q95460 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MR1Q95460 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
MR1Q95460 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
MR1Q95460 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
MR1Q95460 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MR1Q95460 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.04■□□□□ 0.32
MR1Q95460 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.04■□□□□ 0.32
MR1Q95460 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 MRPL3P1-201ENST00000400109 1033 ntBASIC17.04■□□□□ 0.32
MR1Q95460 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MR1Q95460 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.04■□□□□ 0.32
MR1Q95460 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.04■□□□□ 0.32
MR1Q95460 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.04■□□□□ 0.32
MR1Q95460 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.04■□□□□ 0.32
MR1Q95460 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.04■□□□□ 0.32
MR1Q95460 SLC25A6P4-201ENST00000586535 553 ntBASIC17.04■□□□□ 0.32
MR1Q95460 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.04■□□□□ 0.32
MR1Q95460 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MR1Q95460 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MR1Q95460 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.04■□□□□ 0.32
MR1Q95460 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms