Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 AC009065.1-201ENST00000564055 1225 ntBASIC19.1■□□□□ 0.65
ATP2A3Q93084 AC111152.3-201ENST00000569699 673 ntBASIC19.1■□□□□ 0.65
ATP2A3Q93084 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A3Q93084 AC007613.1-201ENST00000572811 2597 ntBASIC19.1■□□□□ 0.65
ATP2A3Q93084 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 Z83836.1-201ENST00000624605 1642 ntBASIC19.1■□□□□ 0.65
ATP2A3Q93084 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATP2A3Q93084 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 AP003733.1-201ENST00000491725 852 ntBASIC19.09■□□□□ 0.65
ATP2A3Q93084 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.09■□□□□ 0.65
ATP2A3Q93084 AC068587.9-201ENST00000641814 219 ntBASIC19.09■□□□□ 0.65
ATP2A3Q93084 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 AC135050.7-201ENST00000624508 2218 ntBASIC19.09■□□□□ 0.65
ATP2A3Q93084 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A3Q93084 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.08■□□□□ 0.65
ATP2A3Q93084 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ATP2A3Q93084 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ATP2A3Q93084 AL390961.4-201ENST00000623958 2535 ntBASIC19.08■□□□□ 0.65
ATP2A3Q93084 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
ATP2A3Q93084 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ATP2A3Q93084 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2A3Q93084 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.08■□□□□ 0.65
ATP2A3Q93084 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2A3Q93084 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.08■□□□□ 0.65
ATP2A3Q93084 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A3Q93084 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A3Q93084 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A3Q93084 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A3Q93084 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
ATP2A3Q93084 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP2A3Q93084 DRAXINP1-201ENST00000437611 948 ntBASIC19.08■□□□□ 0.64
ATP2A3Q93084 NUS1P1-201ENST00000446295 882 ntBASIC19.08■□□□□ 0.64
ATP2A3Q93084 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.08■□□□□ 0.64
ATP2A3Q93084 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A3Q93084 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.08■□□□□ 0.64
ATP2A3Q93084 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ATP2A3Q93084 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A3Q93084 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP2A3Q93084 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP2A3Q93084 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP2A3Q93084 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP2A3Q93084 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 TPSP2-201ENST00000561760 610 ntBASIC19.07■□□□□ 0.64
ATP2A3Q93084 AC090616.6-201ENST00000582640 721 ntBASIC19.07■□□□□ 0.64
ATP2A3Q93084 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms