Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SEMA4DQ92854 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 IGHGP-201ENST00000390555 1178 ntBASIC19.49■□□□□ 0.71
SEMA4DQ92854 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.49■□□□□ 0.71
SEMA4DQ92854 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.49■□□□□ 0.71
SEMA4DQ92854 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.49■□□□□ 0.71
SEMA4DQ92854 AP003733.1-201ENST00000491725 852 ntBASIC19.49■□□□□ 0.71
SEMA4DQ92854 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 DUTP2-201ENST00000519164 463 ntBASIC19.49■□□□□ 0.71
SEMA4DQ92854 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 AC008687.5-201ENST00000593746 558 ntBASIC19.49■□□□□ 0.71
SEMA4DQ92854 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.49■□□□□ 0.71
SEMA4DQ92854 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.49■□□□□ 0.71
SEMA4DQ92854 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.49■□□□□ 0.71
SEMA4DQ92854 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.49■□□□□ 0.71
SEMA4DQ92854 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA4DQ92854 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 LINC01238-205ENST00000567549 1107 ntBASIC19.48■□□□□ 0.71
SEMA4DQ92854 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.48■□□□□ 0.71
SEMA4DQ92854 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 AC100803.2-201ENST00000562459 1963 ntBASIC19.48■□□□□ 0.71
SEMA4DQ92854 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA4DQ92854 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SEMA4DQ92854 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA4DQ92854 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA4DQ92854 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA4DQ92854 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA4DQ92854 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA4DQ92854 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA4DQ92854 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA4DQ92854 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA4DQ92854 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.47■□□□□ 0.71
SEMA4DQ92854 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 AC005332.3-201ENST00000589904 676 ntBASIC19.46■□□□□ 0.71
SEMA4DQ92854 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.46■□□□□ 0.71
SEMA4DQ92854 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA4DQ92854 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms