Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 SNHG9-202ENST00000564014 471 ntBASIC30.94■■■□□ 2.54
TRIM41Q8WV44 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 IGHV3OR16-7-201ENST00000604106 360 ntBASIC30.94■■■□□ 2.54
TRIM41Q8WV44 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 AC018445.3-201ENST00000624177 1945 ntBASIC30.94■■■□□ 2.54
TRIM41Q8WV44 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM41Q8WV44 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 IGHV3-47-201ENST00000425060 335 ntBASIC30.93■■■□□ 2.54
TRIM41Q8WV44 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 AC190387.1-201ENST00000551683 408 ntBASIC30.93■■■□□ 2.54
TRIM41Q8WV44 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 GPR32P1-201ENST00000601788 811 ntBASIC30.93■■■□□ 2.54
TRIM41Q8WV44 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 KRT89P-201ENST00000620027 1478 ntBASIC30.93■■■□□ 2.54
TRIM41Q8WV44 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 AL024508.2-201ENST00000607749 1894 ntBASIC30.93■■■□□ 2.54
TRIM41Q8WV44 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TRIM41Q8WV44 AC126763.1-201ENST00000552015 2118 ntBASIC30.92■■■□□ 2.54
TRIM41Q8WV44 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 BAALC-202ENST00000306391 243 ntTSL 5 BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 BAALC-204ENST00000330955 222 ntTSL 5 BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 AC084346.2-201ENST00000607097 949 ntBASIC30.92■■■□□ 2.54
TRIM41Q8WV44 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM41Q8WV44 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 Z69720.1-201ENST00000601483 472 ntBASIC30.91■■■□□ 2.54
TRIM41Q8WV44 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
TRIM41Q8WV44 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 GSAP-205ENST00000430584 600 ntTSL 5 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
TRIM41Q8WV44 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 CSF3-203ENST00000394148 622 ntTSL 3 BASIC30.89■■■□□ 2.54
TRIM41Q8WV44 AC034105.1-201ENST00000563488 319 ntBASIC30.89■■■□□ 2.54
TRIM41Q8WV44 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms