Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 FAM86GP-201ENST00000448322 971 ntBASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 SPDYE22P-201ENST00000582158 798 ntBASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 AL132655.2-201ENST00000596276 594 ntBASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 AC125437.2-201ENST00000625180 2167 ntBASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRUNE2Q8WUY3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 LINC01006-201ENST00000333319 2292 ntBASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 ATP5G2P4-201ENST00000442175 420 ntBASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 AL499627.1-201ENST00000569373 2188 ntBASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRUNE2Q8WUY3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 AL158211.5-201ENST00000623583 2518 ntBASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 AC007952.6-201ENST00000573168 2673 ntBASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 AC003957.1-201ENST00000625108 2673 ntBASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.8■□□□□ 0.6
PRUNE2Q8WUY3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 ACTG1P14-201ENST00000446382 1122 ntBASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRUNE2Q8WUY3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 AC004835.2-201ENST00000603762 682 ntBASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 IRX1P1-201ENST00000438849 1838 ntBASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 MTMR9LP-203ENST00000426597 1545 ntBASIC18.78■□□□□ 0.6
PRUNE2Q8WUY3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms