Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 AL390719.2-201ENST00000606993 987 ntBASIC19.02■□□□□ 0.64
RNF139Q8WU17 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.02■□□□□ 0.64
RNF139Q8WU17 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 LINC01126-201ENST00000623515 1646 ntBASIC19.02■□□□□ 0.64
RNF139Q8WU17 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF139Q8WU17 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF139Q8WU17 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF139Q8WU17 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.02■□□□□ 0.63
RNF139Q8WU17 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF139Q8WU17 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF139Q8WU17 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 ESPNP-201ENST00000270691 2015 ntBASIC19.01■□□□□ 0.63
RNF139Q8WU17 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RNF139Q8WU17 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF139Q8WU17 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF139Q8WU17 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF139Q8WU17 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF139Q8WU17 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF139Q8WU17 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RNF139Q8WU17 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 AC135776.1-201ENST00000319817 2481 ntBASIC19.01■□□□□ 0.63
RNF139Q8WU17 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF139Q8WU17 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF139Q8WU17 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RNF139Q8WU17 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19■□□□□ 0.63
RNF139Q8WU17 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19■□□□□ 0.63
RNF139Q8WU17 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19■□□□□ 0.63
RNF139Q8WU17 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19■□□□□ 0.63
RNF139Q8WU17 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19■□□□□ 0.63
RNF139Q8WU17 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 TSSC2-201ENST00000450217 709 ntBASIC19■□□□□ 0.63
RNF139Q8WU17 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19■□□□□ 0.63
RNF139Q8WU17 AC113404.2-201ENST00000507884 177 ntBASIC19■□□□□ 0.63
RNF139Q8WU17 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19■□□□□ 0.63
RNF139Q8WU17 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF139Q8WU17 AC004263.2-201ENST00000617183 678 ntBASIC19■□□□□ 0.63
RNF139Q8WU17 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 AL353692.3-201ENST00000407031 1396 ntBASIC19■□□□□ 0.63
RNF139Q8WU17 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 AL354751.1-201ENST00000412768 1863 ntBASIC19■□□□□ 0.63
RNF139Q8WU17 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF139Q8WU17 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF139Q8WU17 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19■□□□□ 0.63
RNF139Q8WU17 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms