Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 FLJ16779-201ENST00000612722 7638 ntBASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RAB3IL1Q8TBN0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB3IL1Q8TBN0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB3IL1Q8TBN0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.08■□□□□ 0.49
RAB3IL1Q8TBN0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RAB3IL1Q8TBN0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RAB3IL1Q8TBN0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB3IL1Q8TBN0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RAB3IL1Q8TBN0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 UNC93B5-201ENST00000530315 699 ntBASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 TMEM191A-211ENST00000637163 1067 ntBASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RAB3IL1Q8TBN0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 AC004951.3-201ENST00000418645 1148 ntBASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 NIFKP9-201ENST00000419265 221 ntBASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 AL023806.1-201ENST00000603994 1649 ntBASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB3IL1Q8TBN0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 KRT8P50-201ENST00000562022 1438 ntBASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 AC034236.2-201ENST00000606662 1610 ntBASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms