Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 ABALON-201ENST00000629058 1903 ntBASIC20.52■□□□□ 0.88
RETREG2Q8NC44 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETREG2Q8NC44 MTMR9LP-203ENST00000426597 1545 ntBASIC20.52■□□□□ 0.87
RETREG2Q8NC44 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.52■□□□□ 0.87
RETREG2Q8NC44 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.52■□□□□ 0.87
RETREG2Q8NC44 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 AL022342.1-201ENST00000400363 863 ntBASIC20.51■□□□□ 0.87
RETREG2Q8NC44 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 AC079781.3-201ENST00000449110 356 ntBASIC20.51■□□□□ 0.87
RETREG2Q8NC44 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 AC074051.2-201ENST00000565115 352 ntBASIC20.51■□□□□ 0.87
RETREG2Q8NC44 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 NOC2LP2-201ENST00000407594 1944 ntBASIC20.51■□□□□ 0.87
RETREG2Q8NC44 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.51■□□□□ 0.87
RETREG2Q8NC44 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 AP000593.1-201ENST00000393668 712 ntBASIC20.5■□□□□ 0.87
RETREG2Q8NC44 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 AC138894.3-201ENST00000603787 634 ntBASIC20.5■□□□□ 0.87
RETREG2Q8NC44 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 AC026471.1-201ENST00000564629 3026 ntBASIC20.5■□□□□ 0.87
RETREG2Q8NC44 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.5■□□□□ 0.87
RETREG2Q8NC44 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 AC079776.4-201ENST00000511039 504 ntBASIC20.49■□□□□ 0.87
RETREG2Q8NC44 KRT18P41-201ENST00000518924 1277 ntBASIC20.49■□□□□ 0.87
RETREG2Q8NC44 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RETREG2Q8NC44 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms