Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 AC124864.1-201ENST00000623408 392 ntBASIC16.83■□□□□ 0.28
BEST3Q8N1M1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BEST3Q8N1M1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 AC104819.1-201ENST00000504587 486 ntBASIC16.82■□□□□ 0.28
BEST3Q8N1M1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 AC012615.1-201ENST00000565797 1299 ntBASIC16.82■□□□□ 0.28
BEST3Q8N1M1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 AC004263.2-201ENST00000617183 678 ntBASIC16.82■□□□□ 0.28
BEST3Q8N1M1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BEST3Q8N1M1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 LINC00167-201ENST00000530583 1419 ntBASIC16.81■□□□□ 0.28
BEST3Q8N1M1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 AC074051.2-201ENST00000565115 352 ntBASIC16.81■□□□□ 0.28
BEST3Q8N1M1 AC111152.3-201ENST00000569699 673 ntBASIC16.81■□□□□ 0.28
BEST3Q8N1M1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.81■□□□□ 0.28
BEST3Q8N1M1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 SDHAP2-201ENST00000455183 2001 ntBASIC16.8■□□□□ 0.28
BEST3Q8N1M1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 AC233702.3-201ENST00000578656 1387 ntBASIC16.8■□□□□ 0.28
BEST3Q8N1M1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 FOSL1P1-201ENST00000511041 816 ntBASIC16.8■□□□□ 0.28
BEST3Q8N1M1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 Z69720.1-201ENST00000601483 472 ntBASIC16.8■□□□□ 0.28
BEST3Q8N1M1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.8■□□□□ 0.28
BEST3Q8N1M1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms