Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 AC087289.5-201ENST00000586076 3175 ntBASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS3Q8IXF0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
NPAS3Q8IXF0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 AC112698.1-201ENST00000510299 916 ntBASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 AC025062.2-201ENST00000605477 670 ntBASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 HLA-J-201ENST00000462773 1622 ntBASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
NPAS3Q8IXF0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 AC018445.3-201ENST00000624177 1945 ntBASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 PGAM5P1-201ENST00000518923 814 ntBASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 OR7E14P-202ENST00000530490 1290 ntBASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 AC012640.2-201ENST00000561606 901 ntBASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 AL139288.1-201ENST00000623748 933 ntBASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS3Q8IXF0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 AC098831.1-202ENST00000438821 336 ntBASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 AC092910.1-201ENST00000482027 1129 ntBASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 AC027601.4-201ENST00000611259 610 ntBASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 BX323043.1-201ENST00000641006 1765 ntBASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS3Q8IXF0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS3Q8IXF0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms