Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CROCCP3Q8IVE0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CROCCP3Q8IVE0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CROCCP3Q8IVE0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
CROCCP3Q8IVE0 AL603756.1-201ENST00000606511 2163 ntBASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 AC068338.2-201ENST00000563278 1430 ntBASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 AC099063.4-201ENST00000641099 1602 ntBASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CROCCP3Q8IVE0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 NFIC-211ENST00000641145 8399 ntBASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 AL355472.2-201ENST00000422958 438 ntBASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 AP006587.1-201ENST00000534129 1502 ntBASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CROCCP3Q8IVE0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms