Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 SIRPAP1-201ENST00000448467 1770 ntBASIC17■□□□□ 0.31
CCDC71Q8IV32 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17■□□□□ 0.31
CCDC71Q8IV32 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCDC71Q8IV32 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC71Q8IV32 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17■□□□□ 0.31
CCDC71Q8IV32 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17■□□□□ 0.31
CCDC71Q8IV32 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17■□□□□ 0.31
CCDC71Q8IV32 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 AP000550.4-202ENST00000639755 178 ntBASIC17■□□□□ 0.31
CCDC71Q8IV32 AL031432.5-201ENST00000641059 760 ntBASIC17■□□□□ 0.31
CCDC71Q8IV32 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CCDC71Q8IV32 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17■□□□□ 0.31
CCDC71Q8IV32 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CCDC71Q8IV32 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17■□□□□ 0.31
CCDC71Q8IV32 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CCDC71Q8IV32 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC71Q8IV32 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC71Q8IV32 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC71Q8IV32 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 KRT8P45-201ENST00000414328 1447 ntBASIC16.99■□□□□ 0.31
CCDC71Q8IV32 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 HOMER2P1-201ENST00000455653 964 ntBASIC16.99■□□□□ 0.31
CCDC71Q8IV32 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 AC108860.2-201ENST00000562760 2183 ntBASIC16.99■□□□□ 0.31
CCDC71Q8IV32 AC008556.1-201ENST00000610908 2040 ntBASIC16.99■□□□□ 0.31
CCDC71Q8IV32 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC71Q8IV32 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC71Q8IV32 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms