Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 AC087388.1-201ENST00000571370 1112 ntBASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 AC024563.2-201ENST00000603282 481 ntBASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAB11FIP4Q86YS3 AC005332.8-201ENST00000622750 2735 ntBASIC21.27■□□□□ 0.99
RAB11FIP4Q86YS3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 HTR7P1-202ENST00000624664 4411 ntBASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP4Q86YS3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 ZNF444P1-201ENST00000559497 298 ntBASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 NOC2LP1-202ENST00000452600 2235 ntBASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RAB11FIP4Q86YS3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 AC004263.2-201ENST00000617183 678 ntBASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB11FIP4Q86YS3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 AC093010.1-201ENST00000473625 1624 ntBASIC21.23■□□□□ 0.99
RAB11FIP4Q86YS3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms