Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
MRPL55Q7Z7F7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 AP005242.2-201ENST00000580065 1175 ntBASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 AC093677.2-201ENST00000600169 1863 ntBASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
MRPL55Q7Z7F7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 AL133373.2-201ENST00000623187 2828 ntBASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 AL139384.1-201ENST00000612143 3047 ntBASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 UNC93B2-201ENST00000285383 730 ntBASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
MRPL55Q7Z7F7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
MRPL55Q7Z7F7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms