Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 TSSC2-201ENST00000450217 709 ntBASIC17.37■□□□□ 0.37
RNF44Q7L0R7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF44Q7L0R7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 AC090164.3-201ENST00000610780 2143 ntBASIC17.36■□□□□ 0.37
RNF44Q7L0R7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 ATP5G2P1-201ENST00000433580 426 ntBASIC17.36■□□□□ 0.37
RNF44Q7L0R7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 NPAP1P7-201ENST00000613027 823 ntBASIC17.36■□□□□ 0.37
RNF44Q7L0R7 AC093458.2-201ENST00000623150 629 ntBASIC17.36■□□□□ 0.37
RNF44Q7L0R7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 LINC00167-201ENST00000530583 1419 ntBASIC17.36■□□□□ 0.37
RNF44Q7L0R7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF44Q7L0R7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RNF44Q7L0R7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 AP002383.4-201ENST00000442518 975 ntBASIC17.34■□□□□ 0.37
RNF44Q7L0R7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms