Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H3F3CQ6NXT2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 POM121L3P-201ENST00000419331 1163 ntBASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 KRT16P4-201ENST00000453883 522 ntBASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 AC090340.1-201ENST00000620778 4980 ntBASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H3F3CQ6NXT2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 LINC01711-201ENST00000598340 967 ntBASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 AC099343.3-201ENST00000605834 2503 ntBASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 CROCCP3-202ENST00000420820 1947 ntBASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
H3F3CQ6NXT2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 AC138894.3-201ENST00000603787 634 ntBASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 AC020763.4-201ENST00000623414 4170 ntBASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H3F3CQ6NXT2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms